Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950328.1_cds_XP_016490837.1_81220
CDS Infomation

[gene=LOC107810557] [db_xref=GeneID:107810557] [protein=U-box domain-containing protein 9-like] [protein_id=XP_016490837.1] [location=complement(join(47182..48264,49886..50191))] [gbkey=CDS]
Sequence

ATGGCGAAAACCACCGTAGAGGGCGGAGGAGGGCTGCCGGCGGCGGCTAAAGAGGCGGCA
GAACTGAAAAGGGAGTTGCAGAGAGCAGTAAAGGCTGTAGTTGAAGACGATGATTACAGT
TTAGAAGTCACCGATCGAGCCATGCAGTGTTTATGTGCTTTAAAAGAATTGAAATTGAAA
CCTTTGAATTCAAATCCTTTGGATATTCGTAGCCTTTCTTTGAGTTTACCAATTCCACCC
CATGAATTTGTTTGCCCGCTTTCTGGTCAGCTTATGAAAGACCCTGTTGTTTTGGCTTCT
GGTCAGACATATGACAGGCCATTCATTCAAAAGTGGCTGAAGGATGGCCATCGTACGTGC
CCTGAAACAAAGCAGGTTCTTTCCCATTCAGTTCTCACCCCAAATCATCTAGTGAGGAAA
ATGATTTCACAGTGGTGCCAGAAGCATGGAATTGAGCTGCCCGGCCCTTCCCATGATGAG
AACCAGGATATAATCACAAATGCAGACCGAGATCATTTGAATTCACTGCTTGAGATGTTG
TCCTCTAGTAAAGTTCCGGAGCAGAAAAAAGCTGCAAAAGAAGTTCGCGTCCTGACTAAA
CAGATGCCATCTCTACGGGCTGTTTTCGGGGAGTGCAATGATGCCATTACCAAATTGCTC
AATCCTCTTTTGTCTGGTAACGTGAATACTCATCCTGATTTACAAGAAGATTTGGTCACA
ACAGTTCTGAACATCTCAATACATGACAGTAATAAAAAGCTAGTAGCAGAAAATCCTGTA
GCCCTTCCTTTTCTCATTGAGTCGTTGAAGTTCGGAACACTTGAAACAAGAAGCAATTCT
GCTGCTGCTCTCTTCACATTATCAGCACTTGATTCAAATAAGCATATTATCGCAAAGGTA
GGTGCTCTCAAGCCTTTAATCGACCTCTTGAATGAGGGACAACCATTGGCCATGAAAGAT
GCCGCTTCAGCAATTTTCAACTTGAGCATTGTCCACGAGAATAAGGGTAGAGCTGTCGCC
GAAGGAGCAATAAAGGTGATTATGAAGAAGATCAGGGGTCGCGTACTCATTGACGAGTTA
TTAGCTATTCTTGCCCTGCTGTCCAGTCATCACAAGGCTATCGAGGAAATGGGAGAGCTG
GGAGCAGTCTCTTGTCTCCTAAGTATCATAAACGAGGACACAAGTGATCGCAACAAGGAG
AACTGCATCGCAATCCTCTACACGATGTGTTATAATGACCGTACAAAGTTGAGAGAGATC
TGGTTAGATGAGAGTGTCAATGGGACGATATCTAGTCTTGCTCAAAGCGGGACCTCTAGA
GCCAAGAGGAAGGCGAATGGCATTCTTGAGCGGCTAGATAGATATGTTTCTCTTGTGCAC
ACTACTTGA

Peptide Sequence

PEP ID

XP_016490837.1
PEP Infomation

PREDICTED: U-box domain-containing protein 9-like [Nicotiana tabacum]
Sequence

MAKTTVEGGGGLPAAAKEAAELKRELQRAVKAVVEDDDYSLEVTDRAMQCLCALKELKLK
PLNSNPLDIRSLSLSLPIPPHEFVCPLSGQLMKDPVVLASGQTYDRPFIQKWLKDGHRTC
PETKQVLSHSVLTPNHLVRKMISQWCQKHGIELPGPSHDENQDIITNADRDHLNSLLEML
SSSKVPEQKKAAKEVRVLTKQMPSLRAVFGECNDAITKLLNPLLSGNVNTHPDLQEDLVT
TVLNISIHDSNKKLVAENPVALPFLIESLKFGTLETRSNSAAALFTLSALDSNKHIIAKV
GALKPLIDLLNEGQPLAMKDAASAIFNLSIVHENKGRAVAEGAIKVIMKKIRGRVLIDEL
LAILALLSSHHKAIEEMGELGAVSCLLSIINEDTSDRNKENCIAILYTMCYNDRTKLREI
WLDESVNGTISSLAQSGTSRAKRKANGILERLDRYVSLVHTT

Transcript Sequence

Gene sequence data has not been registered.